PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_040580_mnyx.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family NAC
Protein Properties Length: 209aa    MW: 23930.9 Da    PI: 4.4475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_040580_mnyx.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.91.9e-2371382128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                         p G+rF+Pt +e + +yLk+k++gk l++++  i ev+iy+++P++L k ++ +++   e yf+++ +k +++g++ nr + k g W    
  Bv2_040580_mnyx.t1   7 PIGYRFRPTVQETLIKYLKPKISGKILPEADNpICEVNIYSCHPSELFKDLEDNDEdeiERYFYTTLKKVNESGRNYNRkINKVGKWDGEY 97 
                         89************************8887777**************76555433333578******************66678***9765 PP

                 NAM  88 kdkevlskkgelvglkktLvfykgrapkgekt.dWvmheyrl 128
                           k++l+ +g+++g  k + +   + ++  kt +W mhey++
  Bv2_040580_mnyx.t1  98 -PKKILDVHGQVIGFDKYFKYVPVEIQEIDKTmEWKMHEYSI 138
                         .5888888**************888777777658******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-224143IPR003441NAC domain
PROSITE profilePS5100524.4946160IPR003441NAC domain
PfamPF023652.0E-137138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MTTPRIPIGY RFRPTVQETL IKYLKPKISG KILPEADNPI CEVNIYSCHP SELFKDLEDN  60
DEDEIERYFY TTLKKVNESG RNYNRKINKV GKWDGEYPKK ILDVHGQVIG FDKYFKYVPV  120
EIQEIDKTME WKMHEYSIKP ELLPQGIAEE KKILVELSEA EAAEIKAKMA EEMSSDSDTD  180
DDDEEDAGST EPPPPKQPSA EQPATGPST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010670391.11e-105PREDICTED: trichohyalin-like
TrEMBLA0A0J8BCT02e-96A0A0J8BCT0_BETVU; Uncharacterized protein
STRINGXP_010670391.11e-105(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.12e-11NAC domain containing protein 64