PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_044600_drzk.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 299aa    MW: 32765.7 Da    PI: 4.2847
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_044600_drzk.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62.1e-201262155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                        ++y+GVr++  +g+WvAeIr+p   + r kr +lg+f ta eAa a+++a++ ++g
  Bv2_044600_drzk.t1 12 CKYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFPTALEAALAYDEAARTMYG 62
                        79*****999.**********8...3.35***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.39E-321272No hitNo description
PfamPF008471.2E-141262IPR001471AP2/ERF domain
PROSITE profilePS5103222.0891370IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-211371IPR016177DNA-binding domain
SMARTSM003802.8E-371376IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-311371IPR001471AP2/ERF domain
PRINTSPR003671.1E-91425IPR001471AP2/ERF domain
PRINTSPR003671.1E-93652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MKGKGGPENS LCKYRGVRQR TWGKWVAEIR EPNRGKRLWL GTFPTALEAA LAYDEAARTM  60
YGPSARLNLP DHPSDHPSFS KDDSVDNSAT TTTTATTTTA SYTTASTTSS DTHSGVCVGD  120
HYWVAKVGGP AVKQEDGEGD SQLNCKNASM GFKSGTPDIS VKKEIDNGED GIDINDYLHN  180
LTMDEMFDVD ELLGAIDAGP VSPADYTTNQ GYDAFRSQVE NNNIQLESPE KWSYQNQNPN  240
FLYQFEDQDD AKLLESLHCS DQGYNGADYG FDFLKPGRQE DSVLAVGDHG FLDLAELGM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-181470360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7652435e-54KP765243.1 Haloxylon ammodendron dehydration responsive element binding transcription factor 2A (DREB2A) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010692919.10.0PREDICTED: dehydration-responsive element-binding protein 2C-like isoform X1
RefseqXP_010692920.10.0PREDICTED: dehydration-responsive element-binding protein 2C-like isoform X3
TrEMBLA0A0J8BEU30.0A0A0J8BEU3_BETVU; Uncharacterized protein
STRINGXP_010692919.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.16e-30ERF family protein