PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_045740_qaam.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 399aa    MW: 44695.6 Da    PI: 9.0119
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_045740_qaam.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.1e-3285138255
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+
  Bv2_045740_qaam.t1  85 PRLRWTPDLHLCFVHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 138
                         8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.17681141IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.6E-3081139IPR009057Homeodomain-like
SuperFamilySSF466892.33E-1483139IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-2285140IPR006447Myb domain, plants
PfamPF002494.4E-986137IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MIRAGSGSTE GSKTSLSNDI IDDEFDEDDN KVEEEEVDDN SNNTNSKVVI KINGSSSSSS  60
TVEEDEKKRT TSSGSVRPYN RSKMPRLRWT PDLHLCFVHA VERLGGQERA TPKLVLQLMN  120
IKGLSIAHVK SHLQMYRSKK IDESNQEAMS NNQGIFSDGR DNIYNLSQLP MLQGYNHQRS  180
PFNLRYGDPS WRGHSNQIYG PYNVGTSSDR PRNGSNFNSL SERMIFSSNS INSQVTNVNF  240
LQGQLSNWRT QQSLKNTPIF QPHGSSSSQS ISRPSINLAI SPTTEVAPEK REKSNSFNFL  300
KPSNNNNIEI KQRTIVNHLK RKSLDLDLSL ALAPKNEVDH SLTKANSKDK EKDCELLSLS  360
LLHTPPFSSC SSDKFINKLK EEDASSKNKQ AKTSLDLTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-1886140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1886140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1886140357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1886140357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-1886140458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693076.10.0PREDICTED: two-component response regulator ARR10
TrEMBLA0A0J8BEJ50.0A0A0J8BEJ5_BETVU; Uncharacterized protein
STRINGXP_010693076.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.17e-51G2-like family protein