PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_047470_qmgy.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family NAC
Protein Properties Length: 228aa    MW: 26439.5 Da    PI: 8.034
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_047470_qmgy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.52.3e-2271372128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                         p G+rF Pt +e + +yLk+k+ g  l+ ++ ++ev+iy+++P++L + ++ +++   e yf+++ +k++++g++ nr + k g W    +
  Bv2_047470_qmgy.t1   7 PIGYRFLPTVQETLIKYLKPKIVGGILPQDNPLREVNIYSCHPSELFNDLEDNDEdeiERYFYTTLKKANESGRNYNRkINKVGKWDGEYQ 97 
                         89***************************899**************75444433333578******************66678***98766 PP

                 NAM  89 dkevlskkgelvglkktLvfykgrapkgekt.dWvmheyrl 128
                          k++l+ +g+++g  k + +   + ++  kt +W mhey++
  Bv2_047470_qmgy.t1  98 -KKILDVHGQVIGFDKYFKYAPIEIQEIDKTmEWKMHEYSI 137
                         .778888**************777777666648******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-244159IPR003441NAC domain
PROSITE profilePS5100526.3666161IPR003441NAC domain
PfamPF023651.0E-127137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MTTPRIPIGY RFLPTVQETL IKYLKPKIVG GILPQDNPLR EVNIYSCHPS ELFNDLEDND  60
EDEIERYFYT TLKKANESGR NYNRKINKVG KWDGEYQKKI LDVHGQVIGF DKYFKYAPIE  120
IQEIDKTMEW KMHEYSINPE LLPQGTAEEK KNLVVCRMVM IMKGNKQAKN KTRVIRLGKP  180
QPLSCTNAVP NMMMMHPPQI NYVFTTAEQD IEPTSQTQGD FLLGYLGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693370.11e-171PREDICTED: NAC domain-containing protein 105
TrEMBLA0A0J8BCT01e-169A0A0J8BCT0_BETVU; Uncharacterized protein
STRINGXP_010693370.11e-170(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.17e-11NAC domain containing protein 67