PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_048680_hryd.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 189aa    MW: 21621.4 Da    PI: 6.5187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_048680_hryd.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.27.8e-051501701030
                         HHHHHHHHHHHHHHHCTSCCC CS
                 HLH  10 rrRRdriNsafeeLrellPka 30 
                         r  R++iN++f+ L  l+Pk+
  Bv3_048680_hryd.t1 150 RSKREQINDKFQILENLIPKS 170
                         5569***************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.3E-4149172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MSLSTSAINK TSNFNSEAAL CTLDDFAKNN TTNTLIDEIG NFHRKDNQFA HCFLNDQINV  60
DGDNLLLFDN NLLQLLLKLE KTASLPSCND IGLRLDDFHL QNQEKLKKAD IDKSKGKELV  120
MENDGESSGI NDYYSNARRK KLMKRNRGQR SKREQINDKF QILENLIPKS NKVDFLVHSL  180
ESLFVELLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-