PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_057210_exji.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 518aa    MW: 57963.9 Da    PI: 4.7219
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_057210_exji.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like68.98.4e-2248102156
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                         +pr+ Wtp LH++F ++v+ L G+++AtPkti+elm+v gL+ e v+SHL  YR +
  Bv3_057210_exji.t1  48 RPRMGWTPHLHKKFRDVVACL-GIKNATPKTIMELMDVAGLSHECVASHLKSYRHH 102
                         59*******************.********************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-1245105IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.2E-2146105IPR009057Homeodomain-like
TIGRFAMsTIGR015575.5E-1549102IPR006447Myb domain, plants
SuperFamilySSF520581.7E-14242439IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.102.5E-12260437IPR032675Leucine-rich repeat domain, L domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MDASGAVKSP KNEKVEPHSS SVTSVSATSS ITEQESLKLT GEQRTSKRPR MGWTPHLHKK  60
FRDVVACLGI KNATPKTIME LMDVAGLSHE CVASHLKSYR HHLRSLRKDD DAPPTTLQLF  120
DKMPQCLAGT HQVFDEMPSD GMIVGDALSY CALFPPDHDF EKNTLIQLWM ADGLVLHKPM  180
ERIAGLFCDC CLNKGYFQFS RTNVLTGNAL YKFKGDDHVP SHMVRIEGNS NLNNVSPEVS  240
HVSIRLENVL TKDEAEEACL SDKSELKKLE LHWSDTQYED ILGYGEVLYS LQPHTSLEEL  300
LISCYGGFEL PSWICNLAFS ELVSVSLFEC ENCLVLPSLG QLPSLKFLNI TDFHKLELID  360
YDFYGGLGIS GYVAFPKLEN LTLENMSNLE EWLVYGSFDF PRLIKLTIKH CPKLYSLRTL  420
SCLSSLENLE ISHCTMLASC LDGKLRAGVE TFIVEECPLI TAKHEAPESD EEMETDEAPK  480
TLEDGGQATV DELKELNLGT QEEPRPVYVS ASLTQQEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A2e-2048104157Transcription factor LUX
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672351.11e-168PREDICTED: putative disease resistance protein At3g14460
TrEMBLA0A0K9RK601e-128A0A0K9RK60_SPIOL; Uncharacterized protein
STRINGXP_010672351.11e-168(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.15e-24G2-like family protein