PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_060420_oena.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 426aa    MW: 47391.9 Da    PI: 6.7086
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_060420_oena.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.35.3e-31252306155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         k+r+rWt+eLH++Fve+v+ LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+
  Bv3_060420_oena.t1 252 KTRIRWTTELHDKFVECVHCLGGADKATPKAILKLMNSDGLTIFHVKSHLQKYRI 306
                         68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.951249309IPR017930Myb domain
SuperFamilySSF466891.42E-17250306IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-28250307IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-23252307IPR006447Myb domain, plants
PfamPF002491.7E-8256305IPR001005SANT/Myb domain
PfamPF143799.5E-21336383IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MSNQKIDFQE QVQQNNGVTV IDDCMVDLGS RDSQFISIRQ PWNMGSCMGG GVDTQPHNVL  60
PANLSSTVMS RFGSPVPGFS TAERYVGLPY DHQISSPTFS SQCSKNYDLE YRSYPCSTEG  120
FSAQLAEQDG ADLQQSRSAV QTAARSLLYG DQSQFYPSAK AYGSPCGNYP GNEHIQQLKN  180
KLLVDFANSD GRNYLFPINE KQDFRILDKS YDSSLGQLSF SSQGEKQGLR PLGAVPLNSG  240
NSFSSGASIS SKTRIRWTTE LHDKFVECVH CLGGADKATP KAILKLMNSD GLTIFHVKSH  300
LQKYRIAKYM PNSTEGKPER RSSLSDVAQL DIKAGVQLKE ALQLQLDVQR RLHEQLEIQR  360
NLQLRIEEQG KQLKMMFDQQ QKTRQTLFGD QNSDNMSPNG PSFTLDELQV SSEEGSGCNN  420
FQTKIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-22252309259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672678.10.0PREDICTED: myb family transcription factor PHL5 isoform X2
TrEMBLA0A0K9RV660.0A0A0K9RV66_SPIOL; Uncharacterized protein
STRINGXP_010672678.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-71G2-like family protein