PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_062830_mhkt.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 267aa    MW: 30326.4 Da    PI: 5.0307
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_062830_mhkt.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.33.7e-1579131155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         ++ +hn+ Er RR++iN+ +  Lr llP+ +   + kKls  +++ ++ eYI +Lq
  Bv3_062830_mhkt.t1  79 KKLNHNASERDRRKKINDMYMSLRALLPSnD---QRKKLSIPATVGRVLEYIPKLQ 131
                         6789*************************66...9999***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.41178130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1379151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1679150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.75E-1479134No hitNo description
PfamPF000102.1E-1279131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-1284136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MLAVSPLCPN LGWEYPIELG TNQEFDNFDF ESIFFNNSIS SSQAQDDQVN QEFNDVVKQS  60
ESPQGTSSID HSDNPVLAKK LNHNASERDR RKKINDMYMS LRALLPSNDQ RKKLSIPATV  120
GRVLEYIPKL QKEVDDLTHK KDVLSSKLSA LEGNIGEFIQ DEKPKNSIIK EKISSCTISA  180
NKLGDKELVI QVSAFEKVSI SEVLLLLEKN GYVVIDISCF QSFGGTTFYN LHLWMNGNYN  240
VNLEKMNEVL LSLLQKQQQM QMMYVYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673162.10.0PREDICTED: transcription factor bHLH101
STRINGXP_010673162.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-42bHLH family protein