PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_062960_chhy.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 449aa    MW: 49511.6 Da    PI: 7.8271
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_062960_chhy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.3e-10164204545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Bv3_062960_chhy.t1 164 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 204
                         788*************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.6E-9160223IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415162206IPR004827Basic-leucine zipper domain
PfamPF001706.5E-7164204IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6164207No hitNo description
CDDcd147083.26E-21164215No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-7165209No hitNo description
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
PfamPF141441.3E-32247321IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MGSKKVKIGT KNGASLTSGM PSFIPSIPIS NSIVTEGDNA SSSRISELGA FEQSLDFRIE  60
DAVDLRNPLF SSLKSSSVPV GPDQFGSFNK ILSLERESPL NLASVSVAHR ENWAESNMAD  120
ASPRTDTSTD DTEDRNPLLE AGHINSKAAS DSSERSKEKV TDQKSLRRLA QNREAARKSR  180
LRKKAYVQQL ENSRLKLTQL EQELQRARQQ GIFISNAGDQ SHGLGGNGAL AFDAEYARWL  240
EEQNRMINEL RTAVNSHASD TELQTVVKSV AAHFDEIFRL KGVAAKADVF HILSGMWKTP  300
AERCFMWIGG FRPSELLKLL VNQLEPLTEQ QLVNIYNLQQ SSQQAEEALS QGMEALQQSL  360
AETLANGTAG STGSSGNVAN YMGQMAMAMG KLGTLEGFLR QADNLRQQTL QQMHLILTTR  420
QSARAILSIH DYFSRLRALS SLWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673021.10.0PREDICTED: transcription factor TGA2.3 isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0K9R1810.0A0A0K9R181_SPIOL; Uncharacterized protein
STRINGXP_010673021.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-134bZIP family protein