PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_063930_wpcq.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 699aa    MW: 80206.9 Da    PI: 8.117
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_063930_wpcq.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.56.9e-094894954
             G2-like  9 eLHerFveaveqLGGsekAtPktilelm.kvkgLtlehvkSHLQkYR 54
                        + H+  veav++LGG++kAtP  +l+ + + + L l +v  HL + +
  Bv3_063930_wpcq.t1 48 NVHQIVVEAVNRLGGIKKATPEVVLDELaSHEWLNLFDVYKHLEMLK 94
                        68**********************986615677999******98865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-44896IPR009057Homeodomain-like
Gene3DG3DSA:3.80.10.105.8E-18251411IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520586.63E-39266429IPR032675Leucine-rich repeat domain, L domain-like
PfamPF138554.4E-7297346IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.105.4E-14454659IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520586.63E-39459661IPR032675Leucine-rich repeat domain, L domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 699 aa     Download sequence    Send to blast
MMKKYYLQLL ELQRSTRSGQ KRLTQEPATP SSSISRFVET KDLVSEENVH QIVVEAVNRL  60
GGIKKATPEV VLDELASHEW LNLFDVYKHL EMLKTSTSYE GKNTWIGSTS GKKPERKQLG  120
VLDQKSSLST GNKDVVRKKF LNKLQDMALS ADEIKYHLEG EKKMWHFCTL FTQNHEFEKD  180
TLIQQWISGG FLKGEHKYSI GDFYFRILLS NDYITKATTW SPNAKDIYKV NTNKLKEDNS  240
TMLHKKFSLL KNLHHHKASK EVQYVSLVVD GIDEVSLERL KEFKDLKALL LLSEDVSSIS  300
KIPRNVFAAL KHMEVLDLSR TNISELPNSI GNMIELKYLD LSFTLIELLP ETLECLLKLE  360
TLKLKECRRL FRLPEGMKKL RSLKHLELDV LGQLSLLPRG MGALTELETL SAYLVHNDDG  420
RSIEELKEMN KLKGSFCISR LENVVHPSEV KKAALFKKKH LKELELRWSD LHQSSNKQVH  480
QDEILQALCP NSSLEQLQIS CYGGTSFPSW IGDPTLENLT SITLFKCDNS EVLPSLGQLP  540
ALKYLSLVEM NNVIEIGKKF RGFDTDHVAF PSLERFTIVG LSKLEMWKEV EKRDYPSLQK  600
LTIERCSNLV AIPSSLFTQL YSLKHVEVIN CQKLAALPDY ILSISLVTLV IEECPLITKW  660
FRKHQDKDRL NTQLVQNLWI DQEQVTNLGL DLARVSLVY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C2e-11307609555829Disease resistance RPP13-like protein 4
6j5t_F2e-11307609555829Disease resistance RPP13-like protein 4
6j5t_G2e-11307609555829Disease resistance RPP13-like protein 4
6j5t_L2e-11307609555829Disease resistance RPP13-like protein 4
6j5t_O2e-11307609555829Disease resistance RPP13-like protein 4
6j5u_A2e-11307609555829Disease resistance RPP13-like protein 4
6j5v_A2e-11307609555829Disease resistance RPP13-like protein 4
6j5w_A2e-11307609555829Disease resistance RPP13-like protein 4
6j6i_C2e-11307609555829Disease resistance RPP13-like protein 4
6j6i_F2e-11307609555829Disease resistance RPP13-like protein 4
6j6i_G2e-11307609555829Disease resistance RPP13-like protein 4
6j6i_L2e-11307609555829Disease resistance RPP13-like protein 4
6j6i_O2e-11307609555829Disease resistance RPP13-like protein 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673185.10.0PREDICTED: putative disease resistance RPP13-like protein 1 isoform X1
STRINGXP_010673185.10.0(Beta vulgaris)