PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv3_064450_hwur.t2

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

G2-like

Protein Properties

Length: 294aa MW: 32631.6 Da PI: 8.6352

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv3_064450_hwur.t2	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.5e-33	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Bv3_064450_hwur.t2 45 KQRLRWTEDLHNRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 99 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.022	42	102	IPR017930	Myb domain
TIGRFAMs	TIGR01557	5.4E-26	45	100	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.74E-17	45	99	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.5E-32	45	100	IPR009057	Homeodomain-like
Pfam	PF00249	3.7E-8	47	98	IPR001005	SANT/Myb domain
Pfam	PF14379	6.6E-24	134	179	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MYHAKKFSTV SLVPHKTQGS EPVANAGVMG SPSMKSSTPP GGGGKQRLRW TEDLHNRFVD 60 AITQLGGPDR ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYLPESPSDG TGSKDEKKAS 120 IDGLTNTDSS QGLQINEALK MQMEVQKRLH EQLEVQRQLQ MRIEAQGKYL QKIIEEQQKL 180 GSVLKASETL PSSSNHEEER EKSPDTQPVR EASPGPTSPR KKQKLDDCST SNVDTLSVPL 240 ENSPKKAFLD QWDRNLYGCS AGFALDFETE FKKQENSEHE QRISSDLDFP GSSK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-22	44	102	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010673242.1	0.0	PREDICTED: myb family transcription factor PHL7 isoform X1
Swissprot	Q9SJW0	4e-71	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A0K9R7H4	1e-163	A0A0K9R7H4_SPIOL; Uncharacterized protein
STRING	XP_010673242.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-73	G2-like family protein