PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_067350_cdzq.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 253aa    MW: 28247 Da    PI: 5.4193
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_067350_cdzq.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-1285136255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +  h e Er+RR+++ + ++ Lr+ lP+      ++K s ++ +e+A++YIk+L+
  Bv3_067350_cdzq.t1  85 KIIHREYERQRRQEMATLYNSLRSNLPPeY---IQGKRSISDHVEEAINYIKHLK 136
                         56699***********************77...********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.66E-1581156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.85983135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.86E-983140No hitNo description
Gene3DG3DSA:4.10.280.102.8E-1085155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-986135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-489141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MFPFQRSCEL SFKISDEGDQ NEQTNNEDQI TLDNNAFVGL NNDSNNANPG RGRGRGRGRG  60
RILSSSSLAG TSSNTNTNND EHERKIIHRE YERQRRQEMA TLYNSLRSNL PPEYIQGKRS  120
ISDHVEEAIN YIKHLKSNVK ELEEKKDQLK QSVESTSSTS EFSGSSNSAG VVGSVVIRQS  180
MVGLQIDISV GYEDEGFSLS SALQVVNDEG LEVVSCTSTK FNDKLIHNLQ CQVRNTISID  240
VNRLQQRLSD LVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15059RGRGRGRGRG
25060RGRGRGRGRGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693645.10.0PREDICTED: transcription factor bHLH118
TrEMBLA0A0J8BC340.0A0A0J8BC34_BETVU; Uncharacterized protein
STRINGXP_010693645.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.15e-26bHLH family protein