PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_067360_mfpk.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 281aa    MW: 31506.2 Da    PI: 8.4578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_067360_mfpk.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-1194145255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +  h e+Er+RR+++ +  + Lr+llP        +K s ++ +++A++YIk+L+
  Bv3_067360_mfpk.t1  94 KDIHREVERQRRQEMSTLHSSLRSLLPMeY---IRGKRSVSDHVTEATRYIKDLE 145
                         5669************************77...*******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.48E-992149No hitNo description
SuperFamilySSF474591.24E-1292168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.86292144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1093169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-894145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.004898150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MFPYQSCELS FQSSNNLENN NTNTSNNYYF QHKVDQHAPT APPTTATTTT HLVHEPHNAL  60
NSNLKTPKPR KPRSKNSTVG KEGEVSGNDI AKKKDIHREV ERQRRQEMST LHSSLRSLLP  120
MEYIRGKRSV SDHVTEATRY IKDLENNVKE LGDKRDKLKE SLSSLENQVI TKDIGCSSSS  180
SMTSTTSRSS NSKTGDYNVS IQKFSRTLQI EIAAGVEEEG PYPLSRALKV LDKEGLDVVS  240
CVSSKVNQRW IYVIYCEVTD ATSVDSSHLQ DKLMSVISSC M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693647.10.0PREDICTED: transcription factor bHLH120
TrEMBLA0A0J8E6W00.0A0A0J8E6W0_BETVU; Uncharacterized protein
STRINGXP_010693647.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-32bHLH family protein