PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv4_096620_mhnx.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

NAC

Protein Properties

Length: 496aa MW: 55764 Da PI: 4.9869

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv4_096620_mhnx.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	34.1	7.8e-11	1	27	102	128
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kktLv+y+grap+g++t Wvmheyrl Bv4_096620_mhnx.t1 1 MKKTLVYYRGRAPHGHRTGWVMHEYRL 27 8************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-14	1	50	IPR003441	NAC domain
PROSITE profile	PS51005	21.001	1	50	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence Send to blast
MKKTLVYYRG RAPHGHRTGW VMHEYRLDER ECEVVSGLQD AYALCRIFKK TSPPTPPKIS 60 PQYAAYTTNM AQMSSDQQSS SMDMYSEGRC DDFDSSAYSV PIERCSNNNF SRGYASSSSS 120 QHRNNMGDGQ WLQYLNDQDG FSFPTPTFQN CASNVPYPPS KVDIALECAR LQHRFSLPPL 180 EVEGSPNFGA TNLSDIELCQ TFFNPGSTNT GGDILDEILS VAQAQQDLIN QSNSNPVMMG 240 GQSYNSNNYV DPMNQLASSS TPVMDNTWED MNTNRLVGMG IVDELKSERM VDFSDLVVFG 300 ERHSDNKNSE RDYGIIPIDS TSTLFQGDHN IQDDNSKSFM NDNDIDNFSS TPSFEVFEEV 360 EVNQSLYVSS HWLAETRFHH VQPTKTVQVY LQRAIGLQNT SIKLFEVETC RKSSFFNKMV 420 GFATNSFKGT GKLLSTRVIS DMKTLYVEDN EFFGKLSSTR YRAACFANKV VNRVWPSLTV 480 VLALCTIWAN HVIPSA

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence Send to blast

MKKTLVYYRG RAPHGHRTGW VMHEYRLDER ECEVVSGLQD AYALCRIFKK TSPPTPPKIS  60
PQYAAYTTNM AQMSSDQQSS SMDMYSEGRC DDFDSSAYSV PIERCSNNNF SRGYASSSSS  120
QHRNNMGDGQ WLQYLNDQDG FSFPTPTFQN CASNVPYPPS KVDIALECAR LQHRFSLPPL  180
EVEGSPNFGA TNLSDIELCQ TFFNPGSTNT GGDILDEILS VAQAQQDLIN QSNSNPVMMG  240
GQSYNSNNYV DPMNQLASSS TPVMDNTWED MNTNRLVGMG IVDELKSERM VDFSDLVVFG  300
ERHSDNKNSE RDYGIIPIDS TSTLFQGDHN IQDDNSKSFM NDNDIDNFSS TPSFEVFEEV  360
EVNQSLYVSS HWLAETRFHH VQPTKTVQVY LQRAIGLQNT SIKLFEVETC RKSSFFNKMV  420
GFATNSFKGT GKLLSTRVIS DMKTLYVEDN EFFGKLSSTR YRAACFANKV VNRVWPSLTV  480
VLALCTIWAN HVIPSA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010694967.1	0.0	PREDICTED: NAC domain-containing protein 86-like
TrEMBL	A0A0J8E4H0	0.0	A0A0J8E4H0_BETVU; Uncharacterized protein
STRING	XP_010694967.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	5e-45	NAC domain containing protein 28