PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_101510_hwwf.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 273aa    MW: 31235.6 Da    PI: 6.1819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_101510_hwwf.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.7e-11109159355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                           h e+Er+RR ++ s    Lr+llP       ++K+s ++ Le+Av+YIk++q
  Bv5_101510_hwwf.t1 109 IIHREVERQRRLEMSSLHISLRSLLPLeY---IKGKPSISAHLEEAVKYIKQMQ 159
                         569************************77...********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.33E-9104163No hitNo description
SuperFamilySSF474591.15E-12105177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.008106158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-11110181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-8110159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-4112164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MMNNLSPPIF DPFCSQNDEL FYNIPDFVPA TQILADQGDQ IIPTQEQQQN DEFINQFPTF  60
IEDPSLETNN NHIVQLKKRS LSSTLRATID YDHKNVDIIP NDKKKKQKII HREVERQRRL  120
EMSSLHISLR SLLPLEYIKG KPSISAHLEE AVKYIKQMQQ KIKGLNDQRD GLRKEVSNIE  180
KHAHDHNNVI INVFKESLEV IVSTKCEDVE GDEGLPLSKV LQCLIQEGLD VVSAISKKVN  240
TNYVHCIHAQ VIDEGNIAID VTNLKKKIAD IQI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010676605.10.0PREDICTED: transcription factor bHLH126
TrEMBLA0A0K9RQM72e-86A0A0K9RQM7_SPIOL; Uncharacterized protein
STRINGXP_010676605.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-29bHLH family protein