PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv5_103320_zryh.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

BES1

Protein Properties

Length: 128aa MW: 14271.9 Da PI: 5.7949

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv5_103320_zryh.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	121.4	1.2e-37	2	69	3	70
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr 70 s r pt +ErEnnk RE+ RR i+ kiyaGLR +Gnyklpk+aDnn+ lkALc eAGw v++DGt+ Bv5_103320_zryh.t1 2 SLRFPTDRERENNKEREKNRRKITRKIYAGLRVHGNYKLPKHADNNDLLKALCDEAGWYVQEDGTVAV 69 5799*************************************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.4E-34	4	86	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence Send to blast
MSLRFPTDRE RENNKEREKN RRKITRKIYA GLRVHGNYKL PKHADNNDLL KALCDEAGWY 60 VQEDGTVAVV ENVAGLKSEL KTQISSGGDV AVSEDQSNLC NKNDGCIQES VGEYGIDLTL 120 SLSLPGYN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	6e-14	24	66	392	434	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	6e-14	24	66	392	434	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	6e-14	24	66	392	434	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	6e-14	24	66	392	434	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015386699.1	9e-33	protein BRASSINAZOLE-RESISTANT 1-like isoform X2
Refseq	XP_024038455.1	9e-33	protein BRASSINAZOLE-RESISTANT 1 isoform X2
Swissprot	Q5Z9E5	4e-16	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A0K9QQR4	1e-49	A0A0K9QQR4_SPIOL; Uncharacterized protein
STRING	XP_010677019.1	2e-87	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36780.1	2e-18	BES1/BZR1 homolog 2

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]