PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv5_113160_mzap.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

bHLH

Protein Properties

Length: 342aa MW: 38201.1 Da PI: 8.1947

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv5_113160_mzap.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.6e-09	153	200	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ ++P + +k Ka +L + ++Y++sLq Bv5_113160_mzap.t1 153 SHSLAERVRREKISERMKMLQAIVPGC----NKVTGKALMLDEIINYVQSLQ 200 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	4.37E-10	147	204	No hit	No description
SuperFamily	SSF47459	4.58E-17	147	218	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.6E-17	149	219	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.173	149	199	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.9E-6	153	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.7E-10	155	205	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009739	Biological Process	response to gibberellin
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MAAFQQFPTS FLVDSVFNYV PAIKTPEILD EFFPNLNNFY QSNENSQKSL IIHNREVSSI 60 ESSCLEQQSL SMADKADSGE QVTQTSLPIK RKRKSRKGSS PNSAISKPRK VKCKKQKEEK 120 EVTTDEKKEN NSNEEPPKGY IHVRARRGQA TDSHSLAERV RREKISERMK MLQAIVPGCN 180 KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLDPMVYNF GLMDHNPMVF GTQQAINNGM 240 ALPMPLIQPT SNGGSSVGQP EAFANNLNAL SCSTTSSATT PTFPGPIVDS SANLFQQEQK 300 PSLLPLQLQD TGSLYWDVNE QQRQNFINQF GFSSCTNLYS LQ

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MAAFQQFPTS FLVDSVFNYV PAIKTPEILD EFFPNLNNFY QSNENSQKSL IIHNREVSSI  60
ESSCLEQQSL SMADKADSGE QVTQTSLPIK RKRKSRKGSS PNSAISKPRK VKCKKQKEEK  120
EVTTDEKKEN NSNEEPPKGY IHVRARRGQA TDSHSLAERV RREKISERMK MLQAIVPGCN  180
KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLDPMVYNF GLMDHNPMVF GTQQAINNGM  240
ALPMPLIQPT SNGGSSVGQP EAFANNLNAL SCSTTSSATT PTFPGPIVDS SANLFQQEQK  300
PSLLPLQLQD TGSLYWDVNE QQRQNFINQF GFSSCTNLYS LQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	116	RKRKSRKGSSPNSAISKPRKVKCKKQK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010678331.1	0.0	PREDICTED: transcription factor bHLH137 isoform X2
TrEMBL	A0A0K9Q9N1	1e-133	A0A0K9Q9N1_SPIOL; Uncharacterized protein
STRING	XP_010678329.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	7e-46	bHLH family protein