PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_113160_mzap.t2
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 343aa    MW: 38329.3 Da    PI: 8.1947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_113160_mzap.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.6e-09154201455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+ ++P +    +k   Ka +L + ++Y++sLq
  Bv5_113160_mzap.t2 154 SHSLAERVRREKISERMKMLQAIVPGC----NKVTGKALMLDEIINYVQSLQ 201
                         8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.54E-10148205No hitNo description
SuperFamilySSF474594.58E-17148219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.173150200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-17150220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-6154201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-10156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MAAFQQFPTS FLVDSVFNYV PAIKTPEILD EFFPNLNNFY QSNENSQKSL IIHNREVSSI  60
ESSCLEQQSL SMADKADSGE QVTQTSLPIK RKRKSRKGSS PNSAISKQPR KVKCKKQKEE  120
KEVTTDEKKE NNSNEEPPKG YIHVRARRGQ ATDSHSLAER VRREKISERM KMLQAIVPGC  180
NKVTGKALML DEIINYVQSL QNQVEFLSMK LASLDPMVYN FGLMDHNPMV FGTQQAINNG  240
MALPMPLIQP TSNGGSSVGQ PEAFANNLNA LSCSTTSSAT TPTFPGPIVD SSANLFQQEQ  300
KPSLLPLQLQ DTGSLYWDVN EQQRQNFINQ FGFSSCTNLY SLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010678330.10.0PREDICTED: transcription factor bHLH137 isoform X1
TrEMBLA0A0K9Q9N11e-135A0A0K9Q9N1_SPIOL; Uncharacterized protein
STRINGXP_010678329.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.26e-46bHLH family protein