PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_163350_ryod.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 288aa    MW: 33236.6 Da    PI: 5.1427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_163350_ryod.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.5e-1966116155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         ++y+G+r+++ +g+W+AeIrdp++     r++lg+f t+eeAa+a+++ ++ ++g
  Bv7_163350_ryod.t1  66 TQYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDNEARIIRG 116
                         58********.**********954...4*******************99988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.19E-3166125No hitNo description
PROSITE profilePS5103223.11767124IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-3267125IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-2267125IPR016177DNA-binding domain
SMARTSM003805.1E-3867130IPR001471AP2/ERF domain
PfamPF008476.2E-1267109IPR001471AP2/ERF domain
PRINTSPR003672.1E-116879IPR001471AP2/ERF domain
PRINTSPR003672.1E-1190106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MCGGAILADI IPRNKGKGFS GLDFWPDAFF STSNRFTNED FHPPKRALPS RGVEQPEKRQ  60
KKQRKTQYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTP EEAARAYDNE ARIIRGKKAK  120
VNFPNEEDHN NTTTTRNYPN QYYQQQQFFD NSYIPETQNF NYTTNLNQIQ EFSSTGLVVN  180
QEFSSGCSSE FVQNAPNLMG VSTNQNKEEV RGNAKEKEVI VVEEEKEEES EVQKLSEELM  240
AYENYMKFYE IPYYDGQSAN IAHHLPSAQE ENATLDLWSF DDTISPAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-21671261474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010684330.10.0PREDICTED: ethylene-responsive transcription factor ERF073
TrEMBLA0A0K9R9801e-107A0A0K9R980_SPIOL; Uncharacterized protein
STRINGXP_010684330.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-35ethylene-responsive element binding protein