PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_170030_eqzo.t2
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family GRF
Protein Properties Length: 223aa    MW: 25460.7 Da    PI: 9.7622
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_170030_eqzo.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC74.51.2e-2383125143
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrksk 43 
                         d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrg+++++k+ 
  Bv7_170030_eqzo.t2  83 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGKNKTKKHI 125
                         79**************************************985 PP
2QLQ477.9e-171545232
                 QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32
                        +FTa+Q+ +L++Q+l +KyL++++PvPp+L 
  Bv7_170030_eqzo.t2 15 PFTASQWKELEQQLLTFKYLISGVPVPPQLF 45
                        8****************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.2E-81450IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088808.7E-121545IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166617.3121550IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.17783127IPR014977WRC domain
PfamPF088791.9E-1984124IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MMILDDRNNK RSPFPFTASQ WKELEQQLLT FKYLISGVPV PPQLFSNVIT NPFASSSSTL  60
FPYQQSLPFG WGCFQVGYGR KIDPEPGRCR RTDGKKWRCS KEAFPDSKYC EKHMHRGKNK  120
TKKHIQVFST TPPKTTTTNT IIPTTPSTTN KPYLSSPVIS SSVSPSYINQ LHSYDHTTSF  180
YPFLSPQSSS FSTHFTESTQ NVTAPHWLLD TQLYDDQPKK DMS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia. {ECO:0000269|PubMed:15326298, ECO:0000269|PubMed:15960617}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010685313.11e-165PREDICTED: growth-regulating factor 5 isoform X1
RefseqXP_010685314.11e-165PREDICTED: growth-regulating factor 5 isoform X2
SwissprotQ8L8A63e-47GRF5_ARATH; Growth-regulating factor 5
TrEMBLA0A0K9RH582e-70A0A0K9RH58_SPIOL; Uncharacterized protein
STRINGXP_010685313.11e-164(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.12e-48growth-regulating factor 5