PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_171150_hihf.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TALE
Protein Properties Length: 747aa    MW: 81533.6 Da    PI: 7.6415
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_171150_hihf.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.11.7e-094324691954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Bv7_171150_hihf.t1 432 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 469
                         554459******************************88 PP
2BELL121.34.2e-39289360172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         +rqelq+kkakLl++leeV++rY+qy+ q+q+v+ssFe++ag+gsak+YtslAlk+iS++FrcLkdai++qi
  Bv7_171150_hihf.t1 289 QRQELQMKKAKLLNMLEEVEQRYRQYNTQMQVVVSSFEQAAGVGSAKLYTSLALKTISKQFRCLKDAIMSQI 360
                         69*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.2E-50182358IPR006563POX domain
PfamPF075268.1E-46190357IPR006563POX domain
PROSITE profilePS5007112.131410473IPR001356Homeobox domain
SMARTSM003892.3E-9413477IPR001356Homeobox domain
CDDcd000861.10E-12413474No hitNo description
SuperFamilySSF466897.7E-17414479IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.8E-29416479IPR009057Homeodomain-like
PfamPF059203.1E-18430469IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    Send to blast
MMATYFHGGS EIQAAGAAGD HNLQTLYLMN PNFIAAYSEG QTPPNMLFLN PANALSQGNL  60
PHAPPPQQPQ QQQFIGIPLG GTHPSEDHGR PSPSSSSSLQ HHHHHQIPTA LHGLSVSRVH  120
PNLWNQGSIP ATASESDMTD HMGFRRPMTA QGLSLSLSPG QQQQQHQQQH QSQVTVVGGS  180
ATSVAASNGV IIGSKFLKAT QELLEEVVNV GNNNKASSGI NNNGEHRSGE SSGVLKEKAK  240
AAAATVKDHS GVGEGICYGG SGGGGGGGGG AAESSCGGSK KIVEISTAQR QELQMKKAKL  300
LNMLEEVEQR YRQYNTQMQV VVSSFEQAAG VGSAKLYTSL ALKTISKQFR CLKDAIMSQI  360
KATYKSLGEE DTTSNGTGIK LEGGAGSRLR YVDHQLRQQR ALQQLGMMQH NAWRPQRGLP  420
ERAVSVLRAW LFEHFLHPYP KDSDKHMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYL  480
EEIKTQEQQN SGNSEDNTTN TITTNKNSNS SKNDASTKKE TTLVGQQAQQ QAEHGGTIIH  540
PHQQHHHVAD QTTNDMISNL SAMSTTSSQG FTLIGTSSDM ESLMARSPKK QRSNSDMQNS  600
PSSILSMDME MKPVDHHQQH QHQRHSFLMT NHGDADTGFN PYIVNNHDLA GRFNPDQMTA  660
HPYHGNAVSL TLGLPHCENL SLGNHQQNFL QNQPNIQLGR RLELGPGDQP DFCGISMAQP  720
SHPNNGFETI DIQNRKRFAA QLVHDFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16419477563Homeobox protein Meis2
3k2a_B2e-16419477563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010685441.10.0PREDICTED: BEL1-like homeodomain protein 1
TrEMBLA0A0K9S0H60.0A0A0K9S0H6_SPIOL; Uncharacterized protein
STRINGXP_010685441.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.35e-94BEL1-like homeodomain 1