PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv7_171340_hdwr.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

YABBY

Protein Properties

Length: 35aa MW: 4119.7 Da PI: 4.6984

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv7_171340_hdwr.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	31	8e-10	3	33	4	34
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkv 34 fs+se+vCyv+C+fCntila s f Bv7_171340_hdwr.t1 3 FSTSERVCYVHCTFCNTILARKEEECSFFYC 33 789****************988777777765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04690	2.2E-6	5	24	IPR006780	YABBY protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0007275	Biological Process	multicellular organism development

Sequence ? help Back to Top
Protein Sequence Length: 35 aa Download sequence Send to blast
MDFSTSERVC YVHCTFCNTI LARKEEECSF FYCVG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-07	YABBY family protein