PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_173470_fxer.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 304aa    MW: 33105.9 Da    PI: 5.0661
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_173470_fxer.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.92.6e-29140192255
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         +rl+Wtp+LH+rFv++v +L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Bv7_173470_fxer.t1 140 ARLVWTPQLHKRFVDVVGHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 192
                         79******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.983134195IPR017930Myb domain
SuperFamilySSF466894.66E-19137196IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-29138197IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-23140192IPR006447Myb domain, plants
PfamPF002494.1E-7142191IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGEVNGDYNG KLNGVEEDDE RVYEWESGLP NADDITPLSQ GLIPLGLLTA FNIRPEPYRT  60
SGEVSQASKD TVSLIRGSNY KSYDDEEDGE EDEQNDDESE NNKKQRRNES PEDADSAAAE  120
AAEDGGGGGG SGGDKAVKRA RLVWTPQLHK RFVDVVGHLG IKNAVPKTIM QLMNVEGLTR  180
ENVASHLQKY RLYLKRMQGG SSSNSSSENG NGNGNGNGGM SVTVPVMPVP VPMMGMMGNY  240
SRNGFESHSY SHNQPHTSNH YNHNQHQQYS NGNGNGNGMM MQSGNRYGSV MSYHHPTHVS  300
PGDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A5e-34139195157Transcription factor LUX
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010685710.10.0PREDICTED: transcription factor BOA
TrEMBLA0A0K9RZP83e-94A0A0K9RZP8_SPIOL; Uncharacterized protein
STRINGXP_010685710.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.12e-51G2-like family protein