PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_178910_dohw.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 249aa    MW: 27911.1 Da    PI: 9.8067
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_178910_dohw.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.21.1e-09132172451
                 AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                         +GV++  k+ +W A I++      +k+++lg+  + eeAa+++++a+ 
  Bv7_178910_dohw.t1 132 TGVYF--KNMKWQAAIKVD-----KKQIHLGTVSSQEEAARLYDRAAF 172
                         69*98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.794119185IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-7133175IPR016177DNA-binding domain
SMARTSM003803.7E-4137187IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-6138177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MVSLRRRKLL GLCTGVQNSF LAPLPLLLKN GNAPAEDATR CSNPGSVHPI PLDDLNISHP  60
QEVNDPSREI GSSNVSDSSN SYDQRNQPNQ PNISGSTSSK ELYGQPITEL EVKRRKQHRR  120
RRINNQEQYV LTGVYFKNMK WQAAIKVDKK QIHLGTVSSQ EEAARLYDRA AFMCGREPNF  180
ELSEEEKQQL RKLKWNEFLA MTRSAINSKR TRRGNVTGKG APSVQNSDWE GEHGVKGFSA  240
SDDADTSTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010696269.10.0PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_010696270.10.0PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A0J8B7910.0A0A0J8B791_BETVU; Uncharacterized protein
STRINGXP_010696269.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-40ERF family protein