PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_180330_mfaa.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family Trihelix
Protein Properties Length: 244aa    MW: 27442.1 Da    PI: 4.4338
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_180330_mfaa.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.56.4e-2227131186
            trihelix   1 rWtkqevlaLiearremeerlrrgk...................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                         rWt+qe+l Li+a++ +e++ ++g+                     +p+W  +s ++ + g++r+p qC+++w+nl +++kk++++e+k +
  Bv7_180330_mfaa.t1  27 RWTRQETLSLIQAKEITESSPNKGRkisstllggslsssslsleNTEPKWVMISTYCNQLGVSRGPAQCRKRWSNLIGDFKKVRAWESKLE 117
                         8*********************987778888888899999998899*******************************************99 PP

            trihelix  73 sessstcpyfdqle 86 
                         +++ s + + ++l+
  Bv7_180330_mfaa.t1 118 DKTDSFWNMRNDLR 131
                         88888999988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.7E-420104IPR009057Homeodomain-like
PROSITE profilePS500906.70220103IPR017877Myb-like domain
PfamPF138379.7E-1026127No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MPINSASNGN QHSVDDHGDE KSRRHPRWTR QETLSLIQAK EITESSPNKG RKISSTLLGG  60
SLSSSSLSLE NTEPKWVMIS TYCNQLGVSR GPAQCRKRWS NLIGDFKKVR AWESKLEDKT  120
DSFWNMRNDL RKENKLPVSF DVEVFKVLEG RETGVVSPLP LQAVPAAVSE DVNDQSYDDE  180
KEDEVEENDG VKREVLEVED EILTDINDGE QDKPGFRLDD NNKTDDNVTE SPVQNFCTPE  240
SVSG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019102702.11e-179PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A0J8B7D61e-178A0A0J8B7D6_BETVU; Uncharacterized protein
STRINGXP_010696439.11e-178(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-43Trihelix family protein