PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_182660_gzjr.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 263aa    MW: 28140.2 Da    PI: 8.5136
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_182660_gzjr.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-194493255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        +++GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a++ a+++++g
  Bv8_182660_gzjr.t1 44 HFRGVRKRP-WGRYAAEIRDPTK---KSRVWLGTFDTAEEAARAYDDAARAFRG 93
                        69*******.**********864...6************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.60E-2243101No hitNo description
Gene3DG3DSA:3.30.730.102.6E-3244101IPR001471AP2/ERF domain
PROSITE profilePS5103223.49944101IPR001471AP2/ERF domain
SMARTSM003804.4E-3844107IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-2244102IPR016177DNA-binding domain
PfamPF008477.1E-134493IPR001471AP2/ERF domain
PRINTSPR003675.7E-114556IPR001471AP2/ERF domain
PRINTSPR003675.7E-116783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MAPKHNGGGG GGGCGGSVAV GVKMTSAVGG ISNGGGGVNV KEAHFRGVRK RPWGRYAAEI  60
RDPTKKSRVW LGTFDTAEEA ARAYDDAARA FRGAKAKTNF PLPNEIHTNI SVNHNNINNN  120
NNNRSSPSQS STVESSSHEK PSHLSPTTTT AVMVDSLPLD LNLAGNFTGS VRFPFVSPAP  180
AVGFPAPMSQ FFYFDAVARQ NQQHQFNKMM MNHVVSERHA PPMARDVQSD SDSSSVVDLN  240
QDLNSVPRGL EIDLNEPPPF DLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-2331101172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010686416.10.0PREDICTED: ethylene-responsive transcription factor 4
TrEMBLA0A0K9R4L72e-74A0A0K9R4L7_SPIOL; Uncharacterized protein
STRINGXP_010686416.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-27erf domain protein 9