PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv8_183710_ukrh.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

Dof

Protein Properties

Length: 323aa MW: 35924.3 Da PI: 8.1241

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv8_183710_ukrh.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.6	4.2e-36	50	107	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +++ lkcprCds ntkfCyynny+ +qPr+fCkaC+r+WtkGG+lrnvPvGggr++++ Bv8_183710_ukrh.t1 50 QSEPLKCPRCDSINTKFCYYNNYNKTQPRHFCKACKRHWTKGGTLRNVPVGGGRKNKR 107 57889***********************************************976665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-23	52	107	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.5E-31	53	106	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.316	54	108	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	56	92	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MGLSSKQVSS DRHGWNQALL QANTIELPKS SSLKRQSSQV QQQQQQQQQQ SEPLKCPRCD 60 SINTKFCYYN NYNKTQPRHF CKACKRHWTK GGTLRNVPVG GGRKNKRLKT SNPGAKTSSK 120 TNNSTSTTTT TTSNDNIKLV LQGQQQEQAR FSLPLGGAAS LGGSFDDKNN FSDAFYQTVI 180 RQPTSSLPET SIIFNNKSLN DGNFLGSSTL SLPQNNNNNN DQDHLQFPYS NLGSFESNPC 240 SISSSNFYNY TGDQAAVIED TVMNSLNNTS SSSMSDHHQQ WTTTNTVIDM SNSWGWDDFD 300 KFVSVEADLT MPWDETEIKP LGP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010686557.1	0.0	PREDICTED: dof zinc finger protein DOF1.4
TrEMBL	A0A0K9R3V0	1e-126	A0A0K9R3V0_SPIOL; Uncharacterized protein
STRING	XP_010686557.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	9e-30	Dof family protein