PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_189710_kyop.t2
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 329aa    MW: 36520.6 Da    PI: 6.4585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_189710_kyop.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.62.9e-102552951055
                         HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         r+RR+riN+++  L++l+P+      +K++ +++Le+Av Y+k Lq
  Bv8_189710_kyop.t2 255 RKRRERINERLKILQSLVPNG-----TKVDISTMLEEAVLYVKFLQ 295
                         9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.989245294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-13245311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-11250304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-11251300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.40E-11254299No hitNo description
PfamPF000101.3E-7255295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MEGGEWSNFN AAVCVNEEAD FMAQMFPNPN DVNLNYAHHH HHHSSSHNYH IMGNNGNNNN  60
NGEGGSSYFS SDSTSNSQNL YRYSQESSYN RSSHDHEVHY HNYFSDNHQH LAAATSNASS  120
LPIDFLHCQL ENGNAVNQDH SEIDPAGEDK TSISYNSKKR ARDFEVQRGK KVRVKRSKSC  180
LALGGDEEEE NDGTAAANRQ SSSTGSLEDD CSSKGTSTTT TTTTTTTTTA NALNSSGKTR  240
ASRGSATDPQ SLYARKRRER INERLKILQS LVPNGTKVDI STMLEEAVLY VKFLQLQIKL  300
LSSDDLWMYA PIAYNGMNIG LDFHINIPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010687425.10.0PREDICTED: transcription factor bHLH84
TrEMBLA0A0K9RPN21e-133A0A0K9RPN2_SPIOL; Uncharacterized protein
STRINGXP_010687425.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-56bHLH family protein