PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_194420_hkxp.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 217aa    MW: 24463.7 Da    PI: 7.9846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_194420_hkxp.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18654254
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                        +y+GVr++  +g Wv+eIr+p        kr++lg+f+tae Aaka+++a+  + 
  Bv8_194420_hkxp.t1  6 KYRGVRQRQ-WGTWVSEIRHP-----LlkKRVWLGTFDTAEAAAKAYDQAAIIMC 54
                        8*****999.**********8.....335*********************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.06E-24565No hitNo description
Gene3DG3DSA:3.30.730.101.0E-32664IPR001471AP2/ERF domain
PfamPF008472.5E-11654IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-21665IPR016177DNA-binding domain
SMARTSM003804.9E-38669IPR001471AP2/ERF domain
PROSITE profilePS5103222.128663IPR001471AP2/ERF domain
PRINTSPR003671.5E-10718IPR001471AP2/ERF domain
PRINTSPR003671.5E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MVPYQKYRGV RQRQWGTWVS EIRHPLLKKR VWLGTFDTAE AAAKAYDQAA IIMCGRNAKT  60
NFPPSQEIGG QKGLNNLASS SPTTHESLSQ ALHTKLCKSN EVPSSSLTCL RLDIENSHIG  120
VWQNRIGPSP SSKWVKIVKF AKNKDVEVDI DQEESINKEQ EKQEKRIENM PIPLPSTNGA  180
FGGIYDQGHH LSMDEEERVA LQMIEELLSR NYCSTTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-166691478Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010687993.11e-163PREDICTED: ethylene-responsive transcription factor WIN1
TrEMBLA0A0A0LKZ72e-65A0A0A0LKZ7_CUCSA; Uncharacterized protein
TrEMBLA0A2P5WDY42e-65A0A2P5WDY4_GOSBA; Uncharacterized protein
STRINGXP_010687993.11e-163(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-47ERF family protein