PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_207520_gjxd.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family Dof
Protein Properties Length: 267aa    MW: 29943.2 Da    PI: 5.8913
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_207520_gjxd.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.81.6e-403393363
              zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                        e+alkcprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Bv9_207520_gjxd.t1 33 EQALKCPRCDSANTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 93
                        7899*****************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-263085IPR003851Zinc finger, Dof-type
PfamPF027016.0E-343490IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4693690IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103874IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048364Biological Processroot development
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MASDSVDSML LMCTKPENGE ELQQEKKPRP ADEQALKCPR CDSANTKFCY YNNYSLTQPR  60
YFCKSCRRYW TKGGTLRNVP VGGGCRKNKR SSSLNKRSTP DSHIDQVHDF IRPLCSTYDQ  120
NLALNHGNTH LDLFGNPIGN SFLDSLRSGL IDNNHLMYYG LEGSGNFGNG ENGVDSNYED  180
RGKLGMQFHD DHYTNLEIMS NGSSGSSTPT VKQELGENVM LWGFPWQLNG EVNYTNGENN  240
EIDLLKEGWN SAIVGSSWNN LLNSPLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689443.10.0PREDICTED: dof zinc finger protein DOF3.1
TrEMBLA0A1S4BLF57e-64A0A1S4BLF5_TOBAC; dof zinc finger protein DOF2.1-like
STRINGXP_010689443.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-38TARGET OF MONOPTEROS 6