PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv9_211370_nood.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

Dof

Protein Properties

Length: 208aa MW: 22330.9 Da PI: 8.5882

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv9_211370_nood.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.7	1.7e-40	22	82	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++lkcprCdstntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+PvGgg+rkn+k+s Bv9_211370_nood.t1 22 QEQQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGSLRNIPVGGGSRKNNKRS 82 6899*****************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-25	17	74	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-33	24	80	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	26	80	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	28	64	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010200	Biological Process	response to chitin
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
MQDPSTAASF VQQLKAPQFP EQEQQLKCPR CDSTNTKFCY YNNYNLSQPR HFCKSCRRYW 60 TKGGSLRNIP VGGGSRKNNK RSSFKRSSSA SDQIPSTSSD LIVATEPKPI PMVSSEIGTG 120 LGLPAPAEGG VGSFTSLLGL ASEGQFNNLL LEGLGRSGLR LGQDDGTGQN PGLEFMGGVQ 180 NGGDQQSCWG ANNAWPDLAI YTPGSKFQ

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00199	DAP	Transfer from AT1G51700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010690053.1	1e-152	PREDICTED: dof zinc finger protein DOF3.1
TrEMBL	A0A0K9RHW0	1e-77	A0A0K9RHW0_SPIOL; Uncharacterized protein
STRING	XP_010690053.1	1e-152	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-37	DOF zinc finger protein 1