PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv9_212910_kjzy.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

NAC

Protein Properties

Length: 298aa MW: 33988.7 Da PI: 7.6592

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv9_212910_kjzy.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.1	6.2e-48	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrFhPt+eel+++yLk+ v+g+k++ ++i ++iy+++PwdLp ++ +e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d++++ Bv9_212910_kjzy.t1 11 PGFRFHPTEEELLDFYLKNMVHGRKMPH-DIIGFLNIYRHDPWDLPGLATIGEREWYFFVPRDRKHSNGGRPNRTTEHGFWKATGSDRKIV 100 9***********************99.99***********8777899*********************************9 PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++gl+ktLvfy+grap+g+ktdW+m+eyrl Bv9_212910_kjzy.t1 101 SLsePKRVMGLRKTLVFYEGRAPRGSKTDWIMNEYRL 137 97556778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	55.03	9	156	IPR003441	NAC domain
SuperFamily	SSF101941	8.11E-57	10	156	IPR003441	NAC domain
Pfam	PF02365	3.4E-25	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MNNSSPSFEL PGFRFHPTEE ELLDFYLKNM VHGRKMPHDI IGFLNIYRHD PWDLPGLATI 60 GEREWYFFVP RDRKHSNGGR PNRTTEHGFW KATGSDRKIV SLSEPKRVMG LRKTLVFYEG 120 RAPRGSKTDW IMNEYRLPDN YVLNNKDIVL CKIYRKATSL KELEQRAAME EEKSAIGFTS 180 YPTSPLSSSN DNHSLQIGGA PITNGQLLQD LFPPMSTNHM ITNLKKEEPN FVETNCKIAA 240 AVTSSPIQLP FGKESLELQL PKSGLEYWAQ DPINSLTCSP WLENLLNFSS PTLISQIL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-49	11	156	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010690266.1	0.0	PREDICTED: NAC domain-containing protein 35
Swissprot	Q10S65	2e-91	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A0K9QXX3	1e-164	A0A0K9QXX3_SPIOL; Uncharacterized protein
STRING	XP_010690266.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-107	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]