PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_216190_tegt.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 305aa    MW: 34159.2 Da    PI: 6.7255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_216190_tegt.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-1380123855
                         HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          Er RR+++++ f++L +llP++     +K +K++i+ +Av+YIk Lq
  Bv9_216190_tegt.t1  80 TERERRKKMRNMFSNLHSLLPQL----PPKADKSTIVDEAVNYIKTLQ 123
                         6*********************6....39******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.09472122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1575135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-1576133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.96E-1277123No hitNo description
SMARTSM003533.9E-780128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-1180123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048735.40E-6231271No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MSHEQEDHEN DAFLWENQSW VNLSNDTSDN SGGEKAVSLP EVREEKEKKR GRGASKKGKG  60
EKGEKKEGEE TPDHEIHIWT ERERRKKMRN MFSNLHSLLP QLPPKADKST IVDEAVNYIK  120
TLQSTFQRLQ KQKLERLQGG PSTNSLPFEP SVAVAATSRL AMLSTRETFM ADQVSSMNNN  180
NNNNNNNSIN NAMRTSTTLS ASASHLPVMI QTWTSSNVVL NICGNDAQFA VYASKRPGLF  240
TTICCVLEKY KLEVLSAHIS SDVDRSVYMI QAHLANGAKD QFPETITVEE IYKQAAGEIL  300
LWVSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010690743.10.0PREDICTED: transcription factor bHLH95
TrEMBLA0A2N9IAL91e-105A0A2N9IAL9_FAGSY; Uncharacterized protein
STRINGXP_010690743.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-48bHLH family protein