PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_218600_mfok.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family G2-like
Protein Properties Length: 387aa    MW: 43396.3 Da    PI: 8.5865
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_218600_mfok.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.31.5e-32246301156
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                         k+r++W+peLH+rFv+a++qLGG+++AtPk+i+elm v+gLt+++vkSHLQkYRl+
  Bv9_218600_mfok.t1 246 KQRRCWSPELHRRFVDALTQLGGPQVATPKQIRELMRVDGLTNDEVKSHLQKYRLH 301
                         79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.259243303IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-30243304IPR009057Homeodomain-like
SuperFamilySSF466896.27E-18244304IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-26246301IPR006447Myb domain, plants
PfamPF002495.5E-7248299IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MINDPSERSR KVDDFLKRLE DELKKIEVFK RELPLCMILL KDAILYLKQE STQYKTRNAH  60
QPVLEEFIPM KKDLSGIEHT QINKTGEEDS GRDKKNWMSS VQLWNTDELP IKSSAPHLNC  120
NQNQNQNQNQ NHVSESQKGN DKRNQVIGGD IFDPCKIRAG SKGFVPLVHH NYPTTTTTFP  180
ELRRKVDKED VNASGLTLLV PGMIKHPEEE SISRVYTPKL GGGRSSNSAS PASSGRPSNQ  240
QTSSRKQRRC WSPELHRRFV DALTQLGGPQ VATPKQIREL MRVDGLTNDE VKSHLQKYRL  300
HTRRVPNDSS TKSGQALSGS WTAQDQYSES SKPSSSQSAS PEGPLQFPGL TGGTSTTGGD  360
SMEDEDDEKS ESYSWKGHVQ RAGKDDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-13246299154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-13246299154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-13246299154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-13246299154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010691017.10.0PREDICTED: myb family transcription factor EFM
TrEMBLA0A0K9RTL50.0A0A0K9RTL5_SPIOL; Uncharacterized protein
STRINGXP_010691017.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-45G2-like family protein