PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_007910_uwzj.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 250aa    MW: 28712.5 Da    PI: 5.7297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_007910_uwzj.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.55e-1357103455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        ++ ++Er RR+++N+++  Lr ++P+      +K++Ka++ + A+ YI++Lq
  Bv_007910_uwzj.t1  57 SNIAAERCRRKKLNDRLLALRAVVPNI-----TKMDKASTIKDAISYIHELQ 103
                        56789*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.09753102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-1657115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.88E-1357107No hitNo description
PfamPF000101.1E-1057103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-1659108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-1459117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550214.99E-6180246No hitNo description
Gene3DG3DSA:3.30.70.2601.0E-4182242No hitNo description
CDDcd048730.00367183245No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MDTFSEEYQL YWDINKYIQN DELASWELDD DISICNTNHL NLANGGAEKS MTCDDNSNIA  60
AERCRRKKLN DRLLALRAVV PNITKMDKAS TIKDAISYIH ELQEQERRIK EDIANFDRRR  120
CNNNGDNNST SSTIDFEQEF SFLSNKNSTD HDRQQYDFNN CCRSSIIDDL KITVSYVGGR  180
IVIVSLSCVN KKGILVKLCE MLESLKLKVT TAHITVVGPK ILKTVYVEAD EQEKDHLRKK  240
IEMAISSLRM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667302.10.0PREDICTED: transcription factor bHLH35 isoform X1
TrEMBLA0A0J8B2X10.0A0A0J8B2X1_BETVU; Uncharacterized protein
STRINGXP_010667302.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.16e-48bHLH family protein