PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_009650_oyjz.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family MYB_related
Protein Properties Length: 202aa    MW: 23063 Da    PI: 9.6386
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_009650_oyjz.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.34.6e-1043672348
                       -HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                       +W++Ia++++ gRt++++k++w+++l
  Bv_009650_oyjz.t1 43 RWAAIAARLP-GRTDNDVKNHWNSHL 67
                       7*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.95E-84274IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-124268IPR009057Homeodomain-like
PfamPF002495.9E-84367IPR001005SANT/Myb domain
PROSITE profilePS500906.7484367IPR017877Myb-like domain
CDDcd001674.22E-74367No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MHPLYKCLSF LVCKVARYLK SRNYVVDKTK VSCPKYYACY FYRWAAIAAR LPGRTDNDVK  60
NHWNSHLRKR KTINVYPETT PSKSHTTRHM VQWESIRLET EARLSLESLY NPSGYSRTNS  120
DHFFSMWNSE VGESFRKIQN ARPLKIDRVS PSSEACSGVT GQVPQHVGVK TEQQQRTDSG  180
SVASGDTSDT AMNMLLDSPT SE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667573.11e-114PREDICTED: transcription factor MYB30-like
TrEMBLA0A0J8B6621e-151A0A0J8B662_BETVU; Uncharacterized protein
STRINGXP_010667573.11e-114(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-36myb domain protein 17