PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_011800_xokj.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 164aa    MW: 18760.7 Da    PI: 4.8928
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_011800_xokj.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.2e-056451355
                       HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       R+++++ +++L +l+ ++    s      +   +A++YIk+Lq
  Bv_011800_xokj.t1  6 RNQMKNLYFQLNSLISQD---ASSTRPIPDQIDEATNYIKQLQ 45
                       99***************7...67777789999**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.1E-5158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-6563IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
METHTRNQMK NLYFQLNSLI SQDASSTRPI PDQIDEATNY IKQLQENVEN LRQRRDSLLL  60
GVVEGSQDDN SSSTRASYPS NSPVRIEVTE NGRAMEVTLI TRLESQSKFT DVMHIFHEEN  120
VEVVKASYSV HENTVFHTIH AKMDEAATSD DFARITENLK KFDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019103220.11e-119PREDICTED: transcription factor bHLH36-like isoform X2
TrEMBLA0A0J8B2D71e-118A0A0J8B2D7_BETVU; Uncharacterized protein
STRINGXP_010667753.11e-60(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-25bHLH family protein