PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_021390_wkye.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family MYB_related
Protein Properties Length: 149aa    MW: 17460.1 Da    PI: 5.1393
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_021390_wkye.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-087299229
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
    Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIar 29
                          ++eE+e+l+++vk++G ++W++I +
  Bv_021390_wkye.t1 72 SVYSKEEEERLIQGVKRFGCRSWRKIRE 99
                       6689*********************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0661767IPR001005SANT/Myb domain
SuperFamilySSF466891.29E-71864IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-81864IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.0E-770126IPR009057Homeodomain-like
SMARTSM007176.0E-470130IPR001005SANT/Myb domain
SuperFamilySSF466895.38E-671129IPR009057Homeodomain-like
PfamPF002491.5E-672100IPR001005SANT/Myb domain
CDDcd001672.91E-574124No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MDSSATTYSS SDQLKGGRLR WTARDVMNLM MGVSKYGHAW STIIKQYDFR GRNAKAISDK  60
FYSIAGKGDR RSVYSKEEEE RLIQGVKRFG CRSWRKIREL TDEDLAEDQV HPGKRSRLDV  120
EDQYDYHSDR DEDMESEGEM ENDNEDRQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0J8B0D01e-105A0A0J8B0D0_BETVU; Uncharacterized protein (Fragment)