PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv_040660_znrx.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

C2H2

Protein Properties

Length: 162aa MW: 18629.1 Da PI: 4.6323

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv_040660_znrx.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	120	143	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C Cg +++++ +++ H + H Bv_040660_znrx.t1 120 YRCDLCGVCYRDRGQFEGHYEMvH 143 9******************98877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.767	120	143	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	122	143	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence Send to blast
DEAPPASDLV LIWRNPDEAG DFLPVIDHPD IDADFSPDLI RLGYQRNRHY NILICRICER 60 CVRAEPEALR THSSLYHGVR VPDEDLGALD GFGPPDLYWL RNAWGLLVRP VVGVRIEIGY 120 RCDLCGVCYR DRGQFEGHYE MVHPLSNLPD TFIERWVQTL SE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0J7YN22	1e-114	A0A0J7YN22_BETVU; Uncharacterized protein (Fragment)