PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_042870_xren.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family C2H2
Protein Properties Length: 88aa    MW: 10142.8 Da    PI: 12.2385
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_042870_xren.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00025676222
                       EETTTTEEESSHHHHHHHHHH CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHirt 22
                       +C+ C+++F +  +L+rH  +
  Bv_042870_xren.t1 56 VCNVCSRTFHDIGQLRRHRLS 76
                       6*****************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.99E-55581No hitNo description
PROSITE patternPS0002805779IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
AWRRTKRTVK TVHGQFQIMA WVSGISACRW RSVIVLTLAS DKKPASNSAA EGVDRVCNVC  60
SRTFHDIGQL RRHRLSKRHF TKPIKQNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0J7YMA88e-58A0A0J7YMA8_BETVU; Uncharacterized protein (Fragment)