PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00271
Common NameKK1_000280
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 416aa    MW: 45710.9 Da    PI: 7.2071
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00271genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-07331371954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r RR++i +++  L++l+P        K++ a++L +A +Y+k L
  C.cajan_00271 331 ARHRREKISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 371
                    599*****************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.881322371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-13328384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.91E-10328376No hitNo description
SMARTSM003531.2E-12328377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-12330380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-4332371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MPNVLNQIQE MQKAQTGHAH SNSERVIYHS AGATTSSEIM DVMQKQNTNL SQHVSTMPVK  60
SGAGASWGET LKSQSYPSLS INGPHHSMNL ISNYMPDFNM AHHRQQQQQL VNGSQNGKGA  120
CSIDSFDHCL LSATNSNTDN SVEDDGISMI LSDCGNLWKF SYGSAASTGE SESNASNGRN  180
NKDMQCSVNE VDETVSQSTL GRGKRVESKT NCSKSSHDQS EMIKVGATAS DSCFSMVQNP  240
SSIEEGGFRL ISDDPPQCKK PRWDRSSFSN SINFQQPTCS IEEPDPEAIA QMKEMIYRAA  300
AFRPVNFGME VVEKPKRKNV RISSDPQTVA ARHRREKISE RIRVLQKLVP GGSKMDTASM  360
LDEAANYLKF LRSQVKALES LGNKVDAMNC PPTSIAFSFN PSFPMHPLSH IHHSQG
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00271
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227985.10.0transcription factor bHLH87
TrEMBLA0A151SGZ90.0A0A151SGZ9_CAJCA; Transcription factor bHLH87
STRINGGLYMA07G01611.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45303257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.11e-80bHLH family protein