PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00324
Common NameKK1_000334
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 326aa    MW: 35542.5 Da    PI: 6.7539
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00324genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.67.1e-18215249135
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                    C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  C.cajan_00324 215 CLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRL 249
                    99*****************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.321209245IPR000679Zinc finger, GATA-type
SMARTSM004012.6E-16209259IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.04E-14212272No hitNo description
Gene3DG3DSA:3.30.50.102.2E-14213247IPR013088Zinc finger, NHR/GATA-type
CDDcd002028.96E-14214261No hitNo description
PROSITE patternPS003440215240IPR000679Zinc finger, GATA-type
PfamPF003201.8E-15215249IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEAPEYFVGG YFGAGGLDQF SPPEKRHADQ KPGEPFAIDD LLDFSHADAI MSDGFFDNVA  60
ANSTDSSTVT AVDSCNSSVS GSDNRFTAAI VPRGFTGDPQ FSGELCVPYD DMAELEWLSN  120
FVEDSFSAEE ELKTLQLLSG AAAAAFASDD GGRNAPFLHS ETPLPGKARS KRSRAAPGDW  180
STRLLHLVVP EQEKAAAAAA KKREGANAEC SGRKCLHCGA EKTPQWRTGP MGPKTLCNAC  240
GVRFKSGRLV PEYRPAASPT FVSTKHSNSH RKVLELRRQK EMQRQQHQQL LSQSSIFGVS  300
NGGDDFLIHH HRHHHHHCGP DFRHVI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00324
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-175AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228414.10.0GATA transcription factor 9
TrEMBLA0A151SHA30.0A0A151SHA3_CAJCA; GATA transcription factor
STRINGXP_007135644.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13643395
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-62GATA transcription factor 9