PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00341
Common NameKK1_000351
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 320aa    MW: 35187.2 Da    PI: 7.7542
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00341genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.00041852231255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  C.cajan_00341 185 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 223
                    6677889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.706173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-10183234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.65E-6183227No hitNo description
Gene3DG3DSA:4.10.280.101.8E-7187230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAGNPNWWTM HPPSLIPPQY VLGSSSIPFN SSTQNPEPPQ SLSQLLFTGL PGEEERVAFS  60
HFQSKKLDGW DEHMLNPSPI SPMVDVIKQE VSQSGNLYHH HGHDQEFQVS GAPWSHNMVP  120
VSSSPRSSVA SLSSNNLLDF TYNKTDYRKN QLPDHTSECN SAASGGVYKK TKSQPSSSQP  180
PLKVRKEKLG DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQSQIEALS SPYLGNGSKN  240
MRNPQSQQVH GERNSVFPED PGQLLNDNGL KRKGAPNQDA KDKPKDLRSR GLCLVPVSCT  300
QHVGNENGAD YWTPAYGSGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00341
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226590.10.0transcription factor bHLH68 isoform X1
RefseqXP_020226591.10.0transcription factor bHLH68 isoform X1
RefseqXP_020226592.10.0transcription factor bHLH68 isoform X1
SwissprotQ8S3D13e-69BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A151SH630.0A0A151SH63_CAJCA; Transcription factor bHLH68
STRINGGLYMA07G02120.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.17e-65bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]