PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00414
Common NameKK1_000427
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 243aa    MW: 27196.6 Da    PI: 6.9606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00414genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000271822201255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  C.cajan_00414 182 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 220
                    6678889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.719170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-10180231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-7180226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.57E-6180224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MMAGNPNWWS MHPPPLIPPQ YVLPPSSIPF NSLTENPEPP QSWSQLLSTG LPGEEEKLGF  60
SHFQPKNWDV QFLNTASRVP ILDVIKQEVS QRGNLYDHGL EEFQASGPAG SSWSHMVPVS  120
SPGSCVTSLS SNNILDFTYN KSDHRNNLLQ DQISECNSTA TVAVWKKARV QPSSSQAPLK  180
VRKEKLGDRI TALHQLVSPF GKTDTASVLL EAIGYIRFLQ GQIEVMFPRF SDRNPQQHHR  240
DQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00414
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227257.11e-165transcription factor bHLH68
TrEMBLA0A151SHI91e-180A0A151SHI9_CAJCA; Transcription factor bHLH68
STRINGGLYMA15G02020.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-27bHLH family protein