PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00569
Common NameKK1_000588
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 387aa    MW: 42486.2 Da    PI: 4.7049
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00569genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-19118167255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  C.cajan_00569 118 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 167
                    69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.092118175IPR001471AP2/ERF domain
SMARTSM003802.7E-36118181IPR001471AP2/ERF domain
CDDcd000183.36E-32118176No hitNo description
Gene3DG3DSA:3.30.730.102.1E-32118177IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-22118177IPR016177DNA-binding domain
PfamPF008473.9E-12119167IPR001471AP2/ERF domain
PRINTSPR003671.2E-11119130IPR001471AP2/ERF domain
PRINTSPR003671.2E-11141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MCGGAIISDF IPAGPAGRSR RVTADILWPN LRNGKRFSKP VLDDDFEAGF RDFKDDSEIE  60
EDEEEEDEDL IMVGVKPFGG FSHSANASKP LSRGSASVKS AESKGQAEKC AKRKRKNQYR  120
GIRQRPWGKW AAEIRDPRKG VRVWLGTFNT AEEAARAYDA EARRIRGKKA KVNFPDEAAG  180
VSSKRYKANP EAQPMKESLS SVKPKMNSMF NFGDNLEGYY SPMDQVEQKP MVNQFVNTAP  240
FAGNGVQVSP VVTPSADVTA YFSSEHSSNS FDYSDLGWGE QGPKTPEISS ILSAPLEGES  300
QFVQGGADEK KNTSQEMIPV QNDSAKTLSE ELADIESQLK FFEAPFLDGN WVDASLASLL  360
SSADATQDNP MNLWSFDDLP SMAGGVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-201181771474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00569
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN4166020.0JN416602.1 Glycine max cultivar Jilin 32 ethylene-responsive transcription factor 7 (ERF7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226381.10.0ethylene-responsive transcription factor RAP2-12 isoform X1
TrEMBLA0A151SHX70.0A0A151SHX7_CAJCA; Ethylene-responsive transcription factor RAP2-2
STRINGXP_007135380.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48083252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.34e-59related to AP2 2