PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_00797
Common NameKK1_000820
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 491aa    MW: 54469.7 Da    PI: 6.0982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_00797genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.8e-13325371455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                    +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI++Lq
  C.cajan_00797 325 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 371
                    799***********************66......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142156.0E-5151235IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.047321370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-18324384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.79E-15324375No hitNo description
PfamPF000101.4E-10325371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-18325384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-17327376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MKIDVGLGGV WNEEEKATMV EVLGRGAFDY LAANSVPNEN LLMAFGSGEN LQNKLADLVE  60
RPNAWNFSWS YAILWQISQS KYGDWVLGWG DGCCREPREG EEVRERGVVE DEKVQRMRKR  120
VLQKLHTSFG GSDEDNYAFG LDRVTDMEMF FLASMYFSFP RGVGGPGKCF AFGKHLWLLD  180
VLKSGFDYCV RSFLAKSAGI RTVVLVPTDL GVVEVGSVRV VGESFELLHA VKSVFSSQAS  240
LVPPRVVKPI APLDLVSEKR DENANAVFSG LAIGDKNKNS NDDNSRGHPN GRSIIVESEI  300
SDVAEDRRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL  360
GDAIAYINEL QAKLKTMESE RERFGSTSMD GSVTEAYARV ENHHNGALDV DIQAAQDGVI  420
VQVSCPIDVH PVSIVFQTLK DAEIGVVESK LTAANDTVFH TFVVKSKGPD QLTKEKLIAL  480
FSKESNTIQT L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A2e-30319381264Transcription factor MYC2
5gnj_B2e-30319381264Transcription factor MYC2
5gnj_E2e-30319381264Transcription factor MYC2
5gnj_F2e-30319381264Transcription factor MYC2
5gnj_G2e-30319381264Transcription factor MYC2
5gnj_I2e-30319381264Transcription factor MYC2
5gnj_M2e-30319381264Transcription factor MYC2
5gnj_N2e-30319381264Transcription factor MYC2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306314RRPRKRGRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_00797
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212241.10.0transcription factor bHLH13
SwissprotA0A3Q7HES41e-110MTB2_SOLLC; Transcription factor MTB2
TrEMBLA0A151SIN50.0A0A151SIN5_CAJCA; Transcription factor bHLH13
STRINGMigut.B01884.1.p1e-179(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54483254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01260.34e-87bHLH family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Sun H,Fan HJ,Ling HQ
    Genome-wide identification and characterization of the bHLH gene family in tomato.
    BMC Genomics, 2015. 16: p. 9
    [PMID:25612924]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]