PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01593
Common NameKK1_001632
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 219aa    MW: 24133.8 Da    PI: 5.966
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01593genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1751100255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+++Aa+a++ a++ ++g
  C.cajan_01593  51 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPDMAARAHDVAALTIKG 100
                    69****998.**********843...6**********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.27E-2151109IPR016177DNA-binding domain
PROSITE profilePS5103223.02451108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-3151109IPR001471AP2/ERF domain
PfamPF008478.9E-1251100IPR001471AP2/ERF domain
SMARTSM003801.1E-3651114IPR001471AP2/ERF domain
CDDcd000181.20E-2952110No hitNo description
PRINTSPR003676.1E-105263IPR001471AP2/ERF domain
PRINTSPR003676.1E-107490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDMEQSNPLE SEVQPTTSSS SSITITCSNE EATKEKKKKK KRGNNEGKHP TYRGVRMRQW  60
GKWVSEIREP RKKSRIWLGT FPTPDMAARA HDVAALTIKG SSAYLNFPEL AAELPRPATT  120
SPKDIQVAAA KAAVLDFGHR SHEAESELSR AVSSSSLTQA SSSSNCSLNG EDDTFLDLPD  180
LSLDLTHGGA DEFHYSSAWL VAGAEQGFRL EEPFLWESY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-17491081272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13541KKKKKKR
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01593
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF5511661e-176EF551166.1 Glycine max dehydration-responsive element binding protein 6 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029129065.11e-162ethylene-responsive transcription factor ERF038 isoform X1
RefseqXP_029129066.11e-162ethylene-responsive transcription factor ERF038 isoform X2
SwissprotQ8LBQ79e-62ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A151SKZ11e-161A0A151SKZ1_CAJCA; Ethylene-responsive transcription factor ERF034 family
STRINGXP_007155687.11e-101(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-48ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]