PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02052
Common NameKK1_002103
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 210aa    MW: 24068.1 Da    PI: 7.3429
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02052genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.44.4e-26141391128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    lp G+rF+Ptde l  +yL+kk+ +++l+  + ++e+d++++ePw+L+  + + + ++ +f+ ++d+  ++   ++  + +g W+   + +++  +
  C.cajan_02052  14 LPIGYRFDPTDEVLTGYYLRKKILSQPLPH-NLVPECDVFQTEPWRLQgGERYLNWQKFFFYDPKDRVFEN--PQKIGAGNGEWRGVERGQQIELS 106
                    699************************999.89**************943333344455666667666554..33345689**************9 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++e++  ++t vf++g+  + ++t+W+m+e++l
  C.cajan_02052 107 GKEVIAKRNTYVFWEGNGDNFTRTNWLMNEFHL 139
                    *******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3111157IPR003441NAC domain
PROSITE profilePS5100532.57814159IPR003441NAC domain
PfamPF023655.9E-1515139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MELPNESEAR TYRLPIGYRF DPTDEVLTGY YLRKKILSQP LPHNLVPECD VFQTEPWRLQ  60
GGERYLNWQK FFFYDPKDRV FENPQKIGAG NGEWRGVERG QQIELSGKEV IAKRNTYVFW  120
EGNGDNFTRT NWLMNEFHLI LKSNPTMRSG MGIYRIFEVE GRRRKKARVS REGASTNGNS  180
GEVIDAVPTV IDLTETCGSV GDTPPPGSPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-161415017150NO APICAL MERISTEM PROTEIN
1ut4_B1e-161415017150NO APICAL MERISTEM PROTEIN
1ut7_A1e-161415017150NO APICAL MERISTEM PROTEIN
1ut7_B1e-161415017150NO APICAL MERISTEM PROTEIN
4dul_A1e-161415017150NAC domain-containing protein 19
4dul_B1e-161415017150NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02052
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228032.11e-156NAC domain-containing protein 41 isoform X2
TrEMBLA0A151SM401e-154A0A151SM40_CAJCA; NAC domain-containing protein 7
STRINGXP_007161703.12e-74(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134131127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.29e-23NAC domain containing protein 41