PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02058
Common NameKK1_002109
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 163aa    MW: 17973.2 Da    PI: 9.2329
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02058genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000463254123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ C++ F ++  L  H++ H
  C.cajan_02058 32 FQCHFCHRKFYTSQALGGHQNAH 54
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.44E-62859No hitNo description
PROSITE profilePS5015710.723259IPR007087Zinc finger, C2H2
PROSITE patternPS0002803454IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009909Biological Processregulation of flower development
GO:0010582Biological Processfloral meristem determinacy
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MADPATIYEF LKQQPSSGAK RAAPPATTTR TFQCHFCHRK FYTSQALGGH QNAHKLERAA  60
ARRTTVNINV PFHNNNGPLP LKPTDPKPRP EPLEPASPPT GLFFHHPPYW LDVEPLQFQT  120
THVTATLPLP FHAPSPSPSP SPSASSHNVD ASEHVNLDLT LRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02058
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351673e-38AC235167.1 Glycine max strain Williams 82 clone GM_WBb0001A17, complete sequence.
GenBankAC2352703e-38AC235270.1 Glycine max strain Williams 82 clone GM_WBb0045N21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225205.11e-115zinc finger protein KNUCKLES
TrEMBLA0A151SM821e-114A0A151SM82_CAJCA; Zinc finger protein KNUCKLES
STRINGXP_007161660.14e-55(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1629333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.15e-14C2H2 family protein