PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02477
Common NameKK1_002539
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 188aa    MW: 21645.1 Da    PI: 9.5396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02477genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.1e-081565655
                   HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   + +E++RR +++   ++L + +P+   k+++  ls  + L +A  YIk+L+
  C.cajan_02477 15 KTIEKNRRIHMKALCFKLVSTIPSkYLKPTKDMLSQQDQLDLAATYIKHLR 65
                   689*********************554666666****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.804964IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-91379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.8E-91383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-51564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MKNATTSDSS KLDRKTIEKN RRIHMKALCF KLVSTIPSKY LKPTKDMLSQ QDQLDLAATY  60
IKHLRERIEK LKGEKEQAMN MMRSNQNNNK IFNIGLELPL LNIQYFDSGI EVMLISGLNK  120
NFMLYEVISV LEEEGAEVVS ANFSTVADKI VYTLHAQVKI SRVGVEPTRV HQRLRELIAP  180
LESWEYIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02477
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0959831e-171BT095983.1 Soybean clone JCVI-FLGm-15G16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227946.11e-138transcription factor bHLH168
TrEMBLA0A151SNI81e-136A0A151SNI8_CAJCA; Transcription factor bHLH36
STRINGGLYMA05G02110.21e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.15e-27bHLH family protein